FTIR analysis of GPCR activation using azido probes.
نویسندگان
چکیده
We demonstrate the site-directed incorporation of an IR-active amino acid, p-azido-L-phenylalanine (azidoF, 1), into the G protein-coupled receptor rhodopsin using amber codon suppression technology. The antisymmetric stretch vibration of the azido group absorbs at approximately 2,100 cm(-1) in a clear spectral window and is sensitive to its electrostatic environment. We used FTIR difference spectroscopy to monitor the azido probe and show that the electrostatic environments of specific interhelical networks change during receptor activation.
منابع مشابه
Genetically-encoded molecular probes to study G protein-coupled receptors.
To facilitate structural and dynamic studies of G protein-coupled receptor (GPCR) signaling complexes, new approaches are required to introduce informative probes or labels into expressed receptors that do not perturb receptor function. We used amber codon suppression technology to genetically-encode the unnatural amino acid, p-azido-L-phenylalanine (azF) at various targeted positions in GPCRs ...
متن کاملβ-Isocyanoalanine as an IR probe: comparison of vibrational dynamics between isonitrile and nitrile-derivatized IR probes.
An infrared (IR) probe based on isonitrile (NC)-derivatized alanine 1 was synthesized and the vibrational properties of its NC stretching mode were investigated using FTIR and femtosecond IR pump-probe spectroscopy. It is found that the NC stretching mode is very sensitive to the hydrogen-bonding ability of solvent molecules. Moreover, its transition dipole strength is larger than that of nitri...
متن کاملMechanism-based probe for the analysis of cathepsin cysteine proteases in living cells.
Mechanism-based probes are providing new tools to evaluate the enzymatic activities of protein families in complex mixtures and to assign protein function. The application of these chemical probes for the visualization of protein labeling in cells and proteomic analysis is still challenging. As a consequence, imaging and proteomic analysis often require different sets of chemical probes. Here w...
متن کاملThermal Analysis of Acrylonitrile/Acrylic Acid Copolymer Dendrigrafted with Citric Acid
Thermal analysis of acrylonitrile/acrylic acid P(AN/AA) copolymer films containing 5%, 10% and 20% acrylic acid dendrigrafted with citric acid (CA) is examined using differential scanning calorimetry (DSC) with various heating rates, thermogravimetry (TGA) and derivative thermogravimetric analysis (DTG). Also, the effect of carboxylic acid on thermal stabilization of the P(AN/AA) copolymers, wh...
متن کاملEstablishment of Photoaffinity Label Derivatives of Fluorene as Probes in Studies of Chemical Carcinogenesis in Mammalian Cell Culture1
Several azido fluorenes, photosensitive analogs of the estab lished carcinogen 2-acetylaminofluorene, have been synthe sized to serve as probes in chemical carcinogenesis and mutagenesis studies. Unlike 2-acetylaminofluorene, these com pounds do not require metabolic activation. However, alkylation to critical targets is achieved through the generation of nitrenes by photolysis at 360 nm in sit...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Nature chemical biology
دوره 5 6 شماره
صفحات -
تاریخ انتشار 2009